Preheat the oven to 325°F/160°C and line 3 cookie sheets with parchment paper. In a bowl, combine the dry ingredients: flour, baking soda, salt, cinnamon, ginger, nutmeg, and cloves. Set aside.
In a separate bowl, with a hand mixer, or in a bowl of a stand mixer, cream butter with sugar until smooth and creamy. Add in the egg yolk, molasses, and vanilla extract, and beat again until well combined.
Using a medium cookie scoop (1.5 tablespoon size) scoop out the dough, roll into balls, and coat in the granulated sugar. Place on the prepared cookie sheets about 2 inches apart to allow the cookies to spread as they bake.